Fig. 1 Here you can see the portion that is still on the surface of the water. The blurry stuff around it is the microbial growth on the surface.
While I've been worrying over the biofilm, I took a closer look at what else was going on with the columns. As before (and could be seen in the post "Oops!") Columns A (Potting Soil + Tap Water) and B (Potting Soil +Thames Water) showed no change. I did notice some things with Columns C and D (Thames Mud + Thames Water). First, there's a green ring around the surface of the water in Column C (fig. 2). Perhaps this is residue from the collapsed biofilm. The water also seems to be a bit daker than before, possibly because of the stirring up of the water, or maybe microbes that are able are "jumping ship" from the drowned portion of the biofilm.
Fig. 2 A green ring around the surface of the water in Column C. Also notice the tan color of the water. The dark brown in the water below the green ring is the half of the biofilm that is suspended in the water.
Fig. 3 Orange growth! Orange growth!! (Also notice the absence of the black ring that had previously been seen where the mud met the water).
Also, I wonder why Column C is so much more productive than any of the other columns? My initial prediction was that Column D, with the Thames Mud AND Thames Water, would have been the most productive, but it has not produced anywhere near the amount of biofilm that Column C produced. Maybe having tap/distilled(ish) water promotes the growth of the microbes better than the slightly saline water found in the river. I'll look for more info about that. Speaking of Column D, here's a good picture of the black particles right above the mud line (fig. 4). It's interesting that the moving of the columns did not seem to affect Column D as it did Column C. The growth on the side of the bottle seems to be doing just fine. Also, there is some orange growth in the mud in Column D too (yay!), though not as much as see in Column C.

Also, I wonder why Column C is so much more productive than any of the other columns? My initial prediction was that Column D, with the Thames Mud AND Thames Water, would have been the most productive, but it has not produced anywhere near the amount of biofilm that Column C produced. Maybe having tap/distilled(ish) water promotes the growth of the microbes better than the slightly saline water found in the river. I'll look for more info about that. Speaking of Column D, here's a good picture of the black particles right above the mud line (fig. 4). It's interesting that the moving of the columns did not seem to affect Column D as it did Column C. The growth on the side of the bottle seems to be doing just fine. Also, there is some orange growth in the mud in Column D too (yay!), though not as much as see in Column C.
Fig. 4 The black colored growth on the sides of the walls of Column D , just above the mud line. Also notice the orange growth in the mud. (For this picture, to best show the black growth, I rotated the column, which is why the orange in the mud is facing away from the window. I later rotated it back to the way it was.)
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